interval_ops                                                                                  \
	  --input1_file /data/mus/visitors/lg/ziang_BAC/nodbac.reg                            \
          --input2_file /data/mus/visitors/lg/uncallable/final_uncallable/NOD.uncallable      \
	  --contig_sizes_file /data/mus/visitors/lg/ucsc_data/mm9.euchromatin                 \
	  --operation diff                                                                    \
	  --verbose                                                                           \
	  --verbose                                                                           \
	  --name final_callable                                                               \
	  --output_file data/regions/nod_bac_final_callable.regions                           \
	  --log_file logs/make_nod_bac_final_uncallable_regions.log
interval_ops                                                                                  \
	  --input1_file /data/mus/visitors/lg/ziang_BAC/nodbac.reg                            \
          --input2_file /data/mus/visitors/lg/uncallable/final_uncallable/NOD.uncallable      \
	  --contig_sizes_file /data/mus/visitors/lg/ucsc_data/mm9.euchromatin                 \
	  --operation intersect                                                               \
	  --verbose                                                                           \
	  --verbose                                                                           \
	  --name final_uncallable                                                             \
	  --output_file data/regions/nod_bac_final_uncallable.regions                         \
	  --log_file logs/make_nod_bac_final_uncallable_regions.log

interval_ops                                                                                  \
	  --input1_file data/regions/nod_bac_final_callable.regions                           \
          --input2_file data/regions/nod_bac_final_uncallable.regions                         \
	  --contig_sizes_file /data/mus/visitors/lg/ucsc_data/mm9.euchromatin                 \
	  --operation union                                                                   \
	  --verbose                                                                           \
	  --verbose                                                                           \
	  --name check.nodbac.recreated                                                       \
	  --log_file logs/make_nod_bac_final_uncallable_regions.log                           
											      
											      
